Recommended Weapon Sets From Missions (Phaser)
As you can now play through any mission at any level when levelling up your character, you can selectively choose which missions to do to make the best use of your time playing the game.
Here is a list of missions and the rewards you should choose if you are using a phaser build.

Recommended Mission Rewards
It is recommended you get these rewards whilst you level up if using a phaser build, to give you a good start for when you start end game activities.
Most of these mission rewards can be upgraded for free up to Mk XII
Under Construction!

Surface Tension
The Counter-Command Multi-Conduit Energy Relay provides additional Phaser Damage, Disruptor Damage, Radiation Damage and Photon Projectile Weapon Damage

Sunrise
Quantum Phase Weapon Set
- Quantum Phase Torpedo Mk XII
- Console - Universal - Quantum Phase Converter Mk XII
- Quantum Phase Beam Array Mk XII
- Quantum Phase Dual Heavy Cannons Mk XII

Beyond the Nexus
Trilithium Weapon Set
1 – 2 Players Only
- Trilithium Tricobalt Torpedo Launcher Mk XII [CrtD]x3
- Trilithium-Enhanced Omni-Directional Phaser Beam Array Mk XII [Acc] [Arc] [Dmg]
- Trilithium-Enhanced Phaser Turret Mk XII [CrtH]x3
- Console - Engineering - Reinforced Armaments Mk XII